BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026A03SP1|AL428473
(537 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1737 1005 0.0
>3x_Contig1737
Length = 17214
Score = 1005 bits (505), Expect = 0.0
Identities = 529/537 (98%), Gaps = 3/537 (0%)
Strand = Plus / Minus
Query: 1 acccggaagtgttgttgtaatcaatgaccatactaccagagaaggcaccagcagtttcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9533 acccggaagtgttgttgtaatcaatgaccatactaccagagaaggcaccagcagtttcga 9474
Query: 61 attctggtccaaatgcaacaccttgctcatcccaaacggtcaaatccttggagacagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9473 attctggtccaaatgcaacaccttgctcatcccaaacggtcaaatccttggagacagcat 9414
Query: 121 gaccccaagtcaatggtaaaccccaatgtggtgcgctctggatagtactgatagtatata 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9413 gaccccaagtcaatggtaaaccccaatgtggtgcg-tctggatagtactgatagtatata 9355
Query: 181 tgccaatcttcttccttagcatcataccacaacccattgggatcgttcatccaaccttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9354 tgccaatcttcttccttagcatcataccacaacccattgggatcgttcatccaaccttct 9295
Query: 241 tctggggaataatggacagcaggtctgttcaaactgagagaagaggacgaattagaagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9294 tctggggaataatggacagcaggtctgttcaaactgagagaagaggacgaattagaagta 9235
Query: 301 gaattccattcgctagcaatggcactaatattagcatcacggcggtggatgacagcagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9234 gaattccattcgctagcaatggcactaatattagcatcacggcggtggatgacagcagca 9175
Query: 361 gatgccaaasgcaccattaatgacaacaactttaacatattttatttcgctttnatgagt 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9174 gatgccaaaggcaccattaatgacaacaactttaacatattttatttcgctttgatgagt 9115
Query: 421 gtgctgctttaagtcaaggagatggcaaggaaatgacacatacatattgmtatattgaac 480
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 9114 gtgctgctttaagtcaaggagatggcaaggaaatgacacatacatattgatatattgaac 9055
Query: 481 ccytcagttccaatggccccatccacactccatatatatatatatatatatatatat 537
|| |||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 9054 ccttcagttccaatggccccatc--caatccatatatatatatatatatatatatat 9000
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,440
Number of Sequences: 1807
Number of extensions: 11440
Number of successful extensions: 4143
Number of sequences better than 1.0e-20: 1
length of query: 537
length of database: 10,358,551
effective HSP length: 16
effective length of query: 521
effective length of database: 10,329,639
effective search space: 5381741919
effective search space used: 5381741919
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)